MIMIC-IV: Clinical Cohort Analysis#
A series of tutorials walking through a complete clinical analysis pipeline on the MIMIC-IV demo dataset (100 de-identified patients from Beth Israel Deaconess Medical Center).
Each script is self-contained and downloads the database automatically on
first use via access().
The demo database covers:
Patient demographics (gender, age)
Hospital admissions with types and locations
Medical procedures coded with ICD standards
Pharmacy prescriptions and medication data
Data access
Use
access("mimic4")(automatic download, cached locally).Manual setup from PhysioNet MIMIC-IV Demo following the MIT-LCP instructions.
Note
SQL ingestion requires connectorx: pip install 'tanat[sql]'
